%% This BibTeX bibliography file was created using BibDesk. %% http://bibdesk.sourceforge.net/ %% Created for Jorn Dunkel at 2024-10-23 23:15:11 -0400 %% Saved with string encoding Unicode (UTF-8) @article{P-2024ZhFeDu, author = {S. Zhang and C. Fei and J. Dunkel}, date-added = {2024-10-23 23:14:34 -0400}, date-modified = {2024-10-23 23:15:11 -0400}, title = {Nonlinear memory in cell division dynamics across species}} @article{P-2024ChEtAl, author = {Y-C Chao and S. Gokhale and L. Lin and A. D. Hastewell and A. Bacanu and Y. Chen and J. Li and J. Liu and H. Lee and J. Dunkel and N. Fakhri}, date-added = {2024-10-23 23:12:42 -0400}, date-modified = {2024-10-23 23:14:15 -0400}, journal = {Submitted}, title = {***}, year = {2024}} @article{P-2024BaEtAl, author = {K. A. Bacik and J. Ondras and A. Rudkin and J. Dunkel and I. S. Kim}, date-added = {2024-10-23 23:10:56 -0400}, date-modified = {2024-10-23 23:14:23 -0400}, journal = {Submitted}, title = {***}, year = {2024}} @article{2024ToEtAl_CellRep, author = {J. F. Totz and A. D. McDougal and L. Wagner and S. Kang and P. T. C. So and J. Dunkel and B. D. Wilts and M. Kolle}, date-added = {2024-10-23 23:08:18 -0400}, date-modified = {2024-10-23 23:10:23 -0400}, journal = {Cell Reports Phys. Sci.}, pages = {102063}, title = {Cell membrane buckling governs early-stage ridge formation in butterfly wing scales}, volume = {5}, year = {2024}} @article{2024StEtAl_PRR, author = {G. Stepaniants and A. D. Hastewell and D. J. Skinner and J. F. Totz and J. Dunkel}, date-added = {2024-10-23 23:07:00 -0400}, date-modified = {2024-10-23 23:08:09 -0400}, journal = {Phys. Rev. Research}, pages = {043062}, title = {Discovering dynamics and parameters of nonlinear oscillatory and chaotic systems from partial observations}, volume = {6}, year = {2024}} @article{2024SaSkDuVo_PRR, author = {M. Salvalaglio and D. J. Skinner and J. Dunkel and A. Voigt}, date-added = {2024-10-23 23:05:25 -0400}, date-modified = {2024-10-23 23:06:47 -0400}, journal = {Phys. Rev. Research}, pages = {023107}, title = {Persistent homology and topological statistics of hyperuniform point clouds}, volume = {6}, year = {2024}} @article{2024OhEtAl_AdvMat, author = {T. Ohmura and D. J. Skinner and K. Neuhaus and G. P. T. Choi and J. Dunkel and K. Drescher}, date-added = {2024-10-23 23:01:18 -0400}, date-modified = {2024-10-23 23:04:02 -0400}, journal = {Adv. Mater.}, pages = {2314059}, title = {In vivo microrheology reveals local elastic and plastic responses inside three-dimensional bacterial biofilms}, volume = {36}, year = {2024}} @article{2024RoEtAl_JMF, author = {N. Romeo and J. 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Imran Alsous}, date-added = {2023-03-25 22:34:23 +0100}, date-modified = {2023-12-06 09:49:02 -0500}, journal = {Nature Physics}, pages = {1927-1935}, title = {Scaling behaviour and control of nuclear wrinkling}, volume = {19}, year = {2023}} @article{2023PaEtAl_Science, author = {V. P. Patil and H. Tuazon and E. Kaufman and T. Chakrobortty and D. Qin and J. Dunkel and S. Bhamla}, date-added = {2023-03-25 22:29:09 +0100}, date-modified = {2023-05-03 23:11:04 -0400}, journal = {Science}, number = {6643}, pages = {392-398}, title = {Ultrafast reversible self-assembly of living tangled matter}, volume = {380}, year = {2023}} @article{P-2022HeEtAl, author = {V. Heinonen and A. J. Abrahams and J. S\l{}omka and K. J. Burns and P. J. Saenz and J. Dunkel}, date-added = {2022-05-21 23:49:49 -0400}, date-modified = {2023-03-25 22:32:35 +0100}, title = {Emergent universal statistics in nonequilibrium systems with dynamical scale selection}, year = {2022}} @article{2023CoEtAl_PRL, author = {A. E. Cohen and A. D. Hastewell and S. Pradhan and S. W. Flavell and J. Dunkel}, date-added = {2022-05-21 23:48:17 -0400}, date-modified = {2023-09-12 18:40:38 -0400}, journal = {Phys. Rev. Lett.}, number = {25}, pages = {258402}, title = {Schr{\"o}dinger dynamics and Berry phase of undulatory locomotion}, volume = {130}, year = {2023}} @article{2024PaKoDu_PRR, author = {V. P. Patil and Z. Kos and J. Dunkel}, date-added = {2022-02-09 23:35:25 -0500}, date-modified = {2024-10-23 23:00:40 -0400}, journal = {Phys. Rev. Research}, pages = {043039}, title = {Harmonic flow field representations of quantum bits and gates}, volume = {6}, year = {2024}} @article{2022KimEtAl_Nature, author = {H. Kim and D. J. Skinner and D. S. Glass and A. E. Hamby and B. A. R. Stuart and J. Dunkel and I. H. Riedel-Kruse}, date-added = {2021-10-27 21:08:18 -0400}, date-modified = {2022-08-10 16:03:50 -0400}, journal = {Nature}, pages = {324-329}, title = {4-bit adhesion logic enables universal multicellular interface patterning}, volume = {608}, year = {2022}} @article{2022TanEtAl_Nature, author = {T. H. Tan and A. Mietke and J. Li and Y. Chen and H. Higinbothom and P. J. Foster and S. Gokhale and J. Dunkel and N. Fakhri}, date-added = {2021-08-20 21:55:25 -0400}, date-modified = {2022-07-13 20:57:49 -0400}, journal = {Nature}, pages = {287-293}, title = {Odd dynamics of living chiral crystals}, volume = {607}, year = {2022}} @article{2022KoDu_SciAdv, author = {Z. Kos and J. Dunkel}, date-added = {2021-08-20 21:46:27 -0400}, date-modified = {2022-08-19 22:17:24 -0400}, journal = {Science Advances}, pages = {eabp8371}, title = {Nematic bits and universal logic gates}, volume = {8}, year = {2022}} @article{2022MiDu_PRX, author = {A. Mietke and J. Dunkel}, date-added = {2021-08-20 21:44:11 -0400}, date-modified = {2022-02-09 23:34:02 -0500}, journal = {Phys. Rev. X}, pages = {011027}, title = {Anyonic defect braiding and spontaneous chiral symmetry breaking in dihedral liquid crystals}, volume = {12}, year = {2022}} @article{2021RoEtAl_eLife, author = {N. Romeo and A. D. Hastewell and A. Mietke and J. Dunkel}, date-added = {2021-08-20 21:31:58 -0400}, date-modified = {2022-01-23 17:44:35 -0500}, journal = {eLife}, pages = {e68679}, title = {Learning developmental mode dynamics from single-cell trajectories}, volume = {10}, year = {2021}} @article{2022JeEtAl_PLoSBio, author = {H. Jeckel and F. Diaz-Pascual and D. J. Skinner and B. Song and E. {Jiminez Sibert} and E. Jelli and S. Vaidya and J. Dunkel and K. Drescher}, date-added = {2021-08-20 21:28:21 -0400}, date-modified = {2022-10-27 22:59:14 -0400}, journal = {PLoS Biol}, number = {10}, pages = {e3001846}, title = {Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species}, volume = {20}, year = {2022}} @article{2021SkDu_PRL, author = {D. J. Skinner and J. Dunkel}, date-added = {2021-08-20 21:24:56 -0400}, date-modified = {2021-11-01 22:44:43 -0400}, journal = {Phys. Rev. Lett.}, pages = {198101}, title = {Estimating entropy production from waiting time distributions}, volume = {127}, year = {2021}} @article{2021LiEtAl_PNAS, author = {J. Liu and J. F. Totz and P. W. Miller and A. D. Hastewell and J. Dunkel and N. Fakhri}, date-added = {2021-07-13 20:44:28 -0400}, date-modified = {2021-08-20 21:34:54 -0400}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, number = {34}, pages = {e2104191118}, title = {Topological braiding and virtual particles on the cell membrane}, volume = {118}, year = {2021}} @article{2021KoEtAl_PNAS, author = {T. Kotwal and F. Moseley and A. Stegmaier and S. Imhof and H. Brand and T. Kiessling and R. Thomale and H. Ronellenfitsch and J. Dunkel}, date-added = {2021-07-13 20:42:50 -0400}, date-modified = {2021-08-20 21:23:15 -0400}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, number = {32}, pages = {e2106411118}, title = {Active topolectrical circuits}, volume = {118}, year = {2021}} @article{2021SaEtal_Nature, author = {P. J. Saenz and G. Pucci and S. E. Turton and A. Goujon and R. R. Rosales and J. Dunkel and J. W. M. Bush}, date-added = {2021-07-13 20:41:28 -0400}, date-modified = {2021-09-24 22:47:44 -0400}, journal = {Nature}, pages = {58-62}, title = {Emergent order in hydrodynamic spin lattices}, volume = {596}, year = {2021}} @article{2021JaEtAl_NatComm, author = {M. James and D. A. Suchla and J. Dunkel and M. Wilczek}, date-added = {2021-07-13 20:40:01 -0400}, date-modified = {2021-09-24 22:44:40 -0400}, journal = {Nature Communications}, pages = {5630}, title = {Emergence and melting of active vortex crystals}, volume = {12}, year = {2021}} @article{2021DeEtAl_Development, author = {M. {Denk-Lobnig} and J. F. Totz and N. C. Heer and J. Dunkel and A. C. Martin}, date-added = {2021-07-13 17:47:07 -0400}, date-modified = {2021-07-13 17:48:35 -0400}, journal = {Development}, pages = {dev199232}, title = {{Combinatorial patterns of graded RhoA activation and uniform F-actin depletion promote tissue curvature}}, volume = {148}, year = {2021}} @article{2021ImEtAl_PNAS, author = {J. {Imran Alsous} and N. Romeo and J. Jackson and F. M. Mason and J. Dunkel and A. C. Martin}, date-added = {2021-07-13 17:45:19 -0400}, date-modified = {2021-07-13 17:46:35 -0400}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, pages = {e2019749118}, title = {Dynamics of hydraulic and contractile wave-mediated fluid transport during Drosophila oogenesis}, volume = {118}, year = {2021}} @article{2021PaDu_PRF, author = {V. P. Patil and J. Dunkel}, date-added = {2021-07-13 17:42:52 -0400}, date-modified = {2021-07-13 17:46:53 -0400}, journal = {Phys. Rev. Fluids}, pages = {064702}, title = {Chiral edge modes in {Helmholtz-Onsager} vortex systems}, volume = {6}, year = {2021}} @article{2023SuEtAl_PNAS, author = {R. Supekar and B. Song and A. D. Hastewell and A. Mietke and J. Dunkel}, date-added = {2021-01-24 05:22:13 +0000}, date-modified = {2023-03-25 22:28:44 +0100}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, pages = {e2206994120}, title = {Learning hydrodynamic equations for active matter from particle simulations and experiments}, volume = {120}, year = {2023}} @article{2021SkDu_PNAS, author = {D. J. Skinner and J. Dunkel}, date-added = {2021-01-24 05:20:22 +0000}, date-modified = {2021-08-20 21:26:07 -0400}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, pages = {e2024300118}, title = {Improved bounds on entropy production in living systems}, volume = {118}, year = {2021}} @article{2021WoEtAl_PhysBio, author = {G. C. L. Wong and J. D. Antani and P. Lele and J. Chen and B. Nan and M. J. K\"uhn and A. Persat and J.-L. Bru and N. M. H{\o}yland-Kroghsbo and A. Siryaporn and J. Conrad and F. Carrara and Y. Yawata and R. Stocker and Y. Brun and G. Whitfield and C. Lee and J. {de Anda} and W. C. Schmidt and R. Golestanian and G. A. {O'Toole} and K. Floyd and F. Yildiz and S. Yang and F. Jin and M. Toyofuku and L. Eberl and N. Nobuhiko and L. Zacharoff and M. Y. {El-Naggar} and S. E. Yalcin and N. Malvankar and M. D. {Rojas-Andrade} and A. Hochbaum and J. Yan and H. A. Stone and N. S. Wingreen and B. Bassler and Y. Wu and H. Xu and K. Drescher and J. Dunkel}, date-added = {2021-01-24 05:13:52 +0000}, date-modified = {2021-10-27 21:13:32 -0400}, journal = {Phys. Biol.}, pages = {051501}, title = {Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation}, url = {http://iopscience.iop.org/article/10.1088/1478-3975/abdc0e}, volume = {18}, year = {2021}, bdsk-url-1 = {http://iopscience.iop.org/article/10.1088/1478-3975/abdc0e}} @article{2021SkEtAl_PRL, author = {D. J. Skinner and B. Song and H. Jeckel and E. Jelly and K. Drescher and J. Dunkel}, date-added = {2021-01-24 05:07:05 +0000}, date-modified = {2021-07-13 17:44:59 -0400}, journal = {Phys. Rev. Lett.}, pages = {048101}, title = {Topological metric detects hidden order in disordered media}, volume = {126}, year = {2021}} @article{2020PaEtAl_PRR, author = {V. P. Patil and Z. Kos and M. Ravnik and J. Dunkel}, date-added = {2021-01-24 05:05:37 +0000}, date-modified = {2021-01-24 05:06:55 +0000}, journal = {Phys. Rev. Research}, pages = {043196}, title = {Discharging dynamics of topological batteries}, volume = {2}, year = {2020}} @article{2020TanEtAl_NatPhys, author = {T. H. Tan and J. Liu and P. W. Miller and M. Tekant and J. Dunkel and N. Fakhri}, date-added = {2021-01-24 05:03:49 +0000}, date-modified = {2021-01-24 05:05:31 +0000}, journal = {Nature Physics}, pages = {657-662}, title = {Topological turbulence in the membrane of a living cell}, volume = {16}, year = {2020}} @article{2020MiDu_SoftMat, author = {P. W. Miller and J. Dunkel}, date-added = {2021-01-24 05:01:50 +0000}, date-modified = {2021-01-24 05:08:50 +0000}, journal = {Soft Matter}, pages = {3991-3999}, title = {Gait-optimized locomotion of wave-driven soft sheets}, volume = {16}, year = {2020}} @article{2020SuEtAl_JFM, author = {R. Supekar and V. Heinonen and K. J. Burns and J. Dunkel}, date-added = {2021-01-24 05:00:24 +0000}, date-modified = {2021-07-13 20:55:34 -0400}, journal = {J. Fluid Mech.}, pages = {A30}, title = {Linearly forced fluid flow on a rotating sphere}, volume = {892}, year = {2020}} @article{2019PeEtAl_PRL, author = {P. Pearce and B. Song and D. J. Skinner and R. Mok and R. Hartmann and P. K. Singh and J. S. Oishi and K. Drescher and J. Dunkel}, date-added = {2021-01-24 04:57:00 +0000}, date-modified = {2021-01-24 04:58:49 +0000}, journal = {Phys. Rev. Lett.}, pages = {258101}, title = {Flow-induced symmetry breaking in growing bacterial biofilms}, volume = {123}, year = {2019}} @article{2020PaSaKoDu_Science, author = {V. P. Patil and J. D. Sandt and M. Kolle and J. Dunkel}, date-added = {2021-01-24 04:57:00 +0000}, date-modified = {2021-01-24 05:00:18 +0000}, journal = {Science}, pages = {71-75}, title = {Topological mechanics of knots and tangles}, volume = {367}, year = {2020}} @article{2019DP_NatMicrobiol, author = {F. Diaz-Pascual and R Hartmanna and M. M\"uller and L. Vidakovic and B. Song and H. Jeckel and K. M. Thormann and F. H. Yildiz and J. Dunkel and H. Link and C. D. Nadell and K. Drescher}, date-added = {2021-01-24 04:54:07 +0000}, date-modified = {2021-01-24 04:56:37 +0000}, journal = {Nature Microbiology}, pages = {2136-2145}, title = {Breakdown of Vibrio cholerae biofilm architecture induced by antibiotics disrupts community barrier function}, volume = {4}, year = {2019}} @article{2019PeEtAl_NatComm, author = {P. Pearce and F. G. Woodhouse and A. Forrow and A. Kelly and H. Kusumaatmaja and J, Dunkel}, date-added = {2021-01-24 04:52:35 +0000}, date-modified = {2021-01-24 04:54:01 +0000}, journal = {Nature Communications}, pages = {5368}, title = {Learning dynamical information from static protein and sequencing data}, volume = {10}, year = {2019}} @article{2019RoDu_FrontPhys, author = {H. Ronellenfitsch and J. Dunkel}, date-added = {2021-01-24 04:51:17 +0000}, date-modified = {2021-01-24 04:52:23 +0000}, journal = {Front. Phys.}, pages = {178}, title = {Chiral topological phases in designed mechanical networks}, volume = {7}, year = {2019}} @article{2019RoEtAl_PRM, author = {H. Ronellenfitsch and N. Stoop and J. Yu and A. Forrow and J. Dunkel}, date-added = {2021-01-24 04:49:36 +0000}, date-modified = {2021-01-24 04:51:09 +0000}, journal = {Phys. Rev. Materials}, pages = {095201}, title = {Inverse design of discrete mechanical metamaterials}, volume = {3}, year = {2019}} @article{2019YeEtAl_DevCell, author = {H. G. Yevick and P. W. Miller and J. Dunkel and A. C. Martin}, date-added = {2021-01-24 04:47:16 +0000}, date-modified = {2021-01-24 04:49:27 +0000}, journal = {Dev. Cell.}, pages = {568-598}, title = {Structural redundancy in supracellular actomyosin networks enables robust tissue folding}, volume = {50}, year = {2019}} @article{2019MoDuKa_PRE, author = {R. Mok and J. Dunkel and V. Kantsler}, date-added = {2021-01-24 04:43:59 +0000}, date-modified = {2021-01-24 04:46:56 +0000}, journal = {Phys. Rev. E}, pages = {052607}, title = {Geometric control of bacterial surface accumulation}, volume = {99}, year = {2019}} @article{2019Heinonen_PRA, author = {V. Heinonen and K. J. Burns and J. Dunkel}, date-added = {2019-09-02 22:23:14 +0000}, date-modified = {2019-09-02 22:25:04 +0000}, journal = {Phys. Rev. A}, pages = {063621}, title = {Quantum hydrodynamics for supersolid crystals and quasicrystals}, volume = {99}, year = {2019}} @article{2019StEtAl_JNNFM, author = {N. Stoop and N. Waisbord and V. Kantsler and V. Heinonen and J. S. Guasto and J. Dunkel}, date-added = {2019-08-27 04:10:54 +0000}, date-modified = {2021-07-13 20:47:56 -0400}, journal = {J. Nonnewton. Fluid Mech.}, pages = {66-74}, title = {Disorder-induced topological transition in porous media flow networks}, volume = {268}, year = {2019}} @article{2019DeEtAl_PNAS, author = {A. Dehkharghani and N. Waisbord and J. Dunkel and J. S. Guasto}, date-added = {2019-08-27 04:04:21 +0000}, date-modified = {2019-08-27 04:05:27 +0000}, journal = {Proc. Natl. Acad. Sci. U.S.A.}, number = {23}, pages = {11119-11124}, title = {Bacterial scattering in microfluidic crystal flows reveals giant active Taylor-Aris dispersion}, volume = {116}, year = {2019}} @article{2019WaEtAl_PRF, author = {N. Waisbord and N. Stoop and D. M. Walkama and J. Dunkel and J. S. Guasto}, date-added = {2019-08-27 03:59:43 +0000}, date-modified = {2021-07-13 20:49:19 -0400}, journal = {Phys. Rev. Fluids}, pages = {063303}, title = {Anomalous percolation flow transition of yield stress fluids in porous media}, volume = {4}, year = {2019}} @article{2019JeEtAl_PNAS, author = {H. Jeckel and E. Jelli and R. Hartmann and P. K. Singh and R. Mok and J. F. Totz and L. Vidakovic and B. Eckhardt and J. Dunkel and K. Drescher}, date-added = {2018-12-10 05:28:59 +0000}, date-modified = {2019-03-28 11:50:54 +0000}, journal = {Proc. Natl. Acad. Sci. USA}, number = {5}, pages = {1489-1494}, title = {Learning the space-time phase diagram of bacterial swarm expansion}, volume = {116}, year = {2019}} @article{2018WoRoDu_PRL, author = {F. G. Woodhouse and H. Ronellenfitsch and J. Dunkel}, date-added = {2018-12-10 05:24:05 +0000}, date-modified = {2018-12-10 05:25:17 +0000}, journal = {Phys. Rev. Lett.}, pages = {178001}, title = {Autonomous Actuation of Zero Modes in Mechanical Networks Far from Equilibrium}, volume = {121}, year = {2018}} @article{2018StDu_SoftMat, author = {N. Stoop and J. Dunkel}, date-added = {2018-12-10 05:22:45 +0000}, date-modified = {2018-12-10 05:23:54 +0000}, journal = {Soft Matter}, pages = {2329-2338}, title = {Defect formation dynamics in curved elastic surface crystals}, volume = {14}, year = {2018}} @article{2018SlToDu_PRF, author = {J. S\l{}omka and A. Townsend and J. Dunkel}, date-added = {2018-12-10 05:21:36 +0000}, date-modified = {2019-08-27 02:16:06 +0000}, journal = {Phys. Rev. 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USA}, number = {9}, pages = {2119-2124}, title = {Spontaneous mirror-symmetry breaking induces inverse energy cascade in 3D active fluids}, volume = {114}, year = {2017}, bdsk-file-1 = {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}} @article{2017SlomkaDunkel_PRF, author = {J. S\l{}omka and J. Dunkel}, date-added = {2017-04-16 03:34:10 +0000}, date-modified = {2017-05-20 17:22:45 +0000}, journal = {Phys. Rev. Fluids}, pages = {043102}, title = {Geometry-dependent viscosity reduction in sheared active fluids}, volume = {2}, year = {2017}, bdsk-file-1 = {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}} @article{2016HeEtAl_PRE, author = {S. Heidenreich and J. Dunkel and S. H. L. Klapp and M. B\"ar}, date-added = {2016-11-22 04:24:46 +0000}, date-modified = {2016-11-22 04:26:09 +0000}, journal = {Phys. Rev. E}, pages = {020601(R)}, title = {Hydrodynamic length-scale selection in microswimmer suspensions}, volume = {94}, year = {2016}} @article{2016OzDu_NJP, author = {A. U. Oza and J. Dunkel}, date-added = {2016-11-22 04:23:13 +0000}, date-modified = {2016-11-22 04:24:35 +0000}, journal = {New J. Phys.}, pages = {093006}, title = {Antipolar ordering of topological defects in active liquid crystals}, volume = {18}, year = {2016}} @article{2016HaHiDu_RSTA, author = {H\"anggi, P. and Hilbert, S. and Dunkel, J.}, date-added = {2016-07-29 16:20:05 +0000}, date-modified = {2021-07-13 20:51:08 -0400}, journal = {Phil. Trans. R. Soc. A}, pages = {2064}, title = {Meaning of temperature in different thermostatistical ensembles}, volume = {374}, year = {2016}, bdsk-url-1 = {http://rsta.royalsocietypublishing.org/content/374/2064/20150039}, bdsk-url-2 = {http://dx.doi.org/10.1098/rsta.2015.0039}} @article{2016LoEtAl_PRL, author = {Jim\'enez, F. L. and Stoop, N. and Lagrange, R. and Dunkel, J. and Reis, P. M.}, date-added = {2016-07-29 16:17:05 +0000}, date-modified = {2017-05-20 17:47:57 +0000}, issue = {10}, journal = {Phys. Rev. Lett.}, pages = {104301}, publisher = {American Physical Society}, title = {Curvature-Controlled Defect Localization in Elastic Surface Crystals}, url = {http://link.aps.org/doi/10.1103/PhysRevLett.116.104301}, volume = {116}, year = {2016}, bdsk-url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.116.104301}, bdsk-url-2 = {http://dx.doi.org/10.1103/PhysRevLett.116.104301}} @article{2016Drescher_PNAS, abstract = {Many bacterial species colonize surfaces and form dense 3D structures, known as biofilms, which are highly tolerant to antibiotics and constitute one of the major forms of bacterial biomass on Earth. Bacterial biofilms display remarkable changes during their development from initial attachment to maturity, yet the cellular architecture that gives rise to collective biofilm morphology during growth is largely unknown. Here, we use high-resolution optical microscopy to image all individual cells in Vibrio cholerae biofilms at different stages of development, including colonies that range in size from 2 to 4,500 cells. From these data, we extracted the precise 3D cellular arrangements, cell shapes, sizes, and global morphological features during biofilm growth on submerged glass substrates under flow. We discovered several critical transitions of the internal and external biofilm architectures that separate the major phases of V. cholerae biofilm growth. Optical imaging of biofilms with single-cell resolution provides a new window into biofilm formation that will prove invaluable to understanding the mechanics underlying biofilm development.}, author = {Drescher, K. and Dunkel, J. and Nadell, C. D. and van Teeffelen, S. and Grnja, I. and Wingreen, N. S. and Stone, H. A. and Bassler, B. L.}, date-added = {2016-07-29 16:15:24 +0000}, date-modified = {2017-05-20 17:47:19 +0000}, journal = {Proc. Natl. Acad. Sci. USA}, number = {14}, pages = {E2066-E2072}, title = {Architectural transitions in Vibrio cholerae biofilms at single-cell resolution}, volume = {113}, year = {2016}, bdsk-url-1 = {http://www.pnas.org/content/113/14/E2066.abstract}, bdsk-url-2 = {http://dx.doi.org/10.1073/pnas.1601702113}} @article{2016Woodhouse_PNAS, author = {Woodhouse, F. G. and Forrow, A. and Fawcett, J. B. and Dunkel, J.}, date-added = {2016-07-29 16:11:59 +0000}, date-modified = {2016-07-29 16:14:02 +0000}, journal = {Proc. Natl. Acad. Sci. USA}, number = {29}, pages = {8200-8205}, title = {Stochastic cycle selection in active flow networks}, volume = {113}, year = {2016}} @article{2016Wioland_NPhys, author = {H. Wioland and F. G. Woodhouse and J. Dunkel and R. E. Goldstein}, date-added = {2016-07-29 16:11:47 +0000}, date-modified = {2016-07-29 16:11:47 +0000}, journal = {Nature Physics}, number = {4}, pages = {341-345}, title = {Ferromagnetic and antiferromagnetic order in bacterial vortex lattices}, volume = {12}, year = {2016}} @article{2015Trong_eLife, author = {P. {Khuc Trong} and H. Doerflinger and J. Dunkel and D. St. Johnston and R. E. Goldstein}, date-added = {2015-08-27 15:32:09 +0000}, date-modified = {2017-04-16 03:35:03 +0000}, journal = {eLife}, pages = {e06088}, title = {Cortical microtubule nucleation can organise the cytoskeleton of Drosophila oocytes to define the anteroposterior axis}, volume = {4}, year = {2015}} @article{2014HiHaDu, author = {S. Hilbert and P. H\"anggi and J. Dunkel}, date-added = {2015-01-26 16:34:56 +0000}, date-modified = {2015-02-09 22:11:30 +0000}, journal = {Phys.~Rev.~E}, pages = {062116}, title = {Thermodynamic laws in isolated systems}, volume = {90}, year = {2014}} @article{2010PuDu, author = {V. B. Putz and J. Dunkel}, date-added = {2014-12-12 05:38:18 +0000}, date-modified = {2015-04-17 01:21:08 +0000}, journal = {EPJ-ST}, pages = {135-144}, title = {{Low Reynolds number hydrodynamics of asymmetric, oscillating dumbbell pairs}}, volume = {187}, year = {2010}} @article{2015Stoop_NatMat, author = {N. Stoop and R. Lagrange and D. Terwagne and P. M. Reis and J. Dunkel}, date-added = {2014-12-12 05:27:19 +0000}, date-modified = {2015-04-17 01:25:44 +0000}, journal = {Nature Materials}, pages = {337-342}, title = {Curvature-induced symmetry breaking determines elastic surface patterns}, volume = {14}, year = {2015}} @article{2014KaEtAl_eLife, author = {V. Kantsler and J. Dunkel and M. Blayney and R. E. Goldstein}, date-added = {2014-05-08 23:16:32 +0000}, date-modified = {2014-06-24 14:56:14 +0000}, journal = {eLife}, pages = {02403}, title = {Rheotaxis facilitates upstream navigation of mammalian sperm cells}, volume = {3}, year = {2014}} @article{2014Du_NatPhys, author = {J. Dunkel}, date-added = {2014-05-08 23:15:41 +0000}, date-modified = {2014-06-24 14:56:42 +0000}, journal = {Nature Physics}, pages = {409-410}, title = {Thermodynamics: Engines and demons}, volume = {10}, year = {2014}} @article{2014WeEtAl_PRE, author = {H. H. Wensink and V. Kantsler and R. E. Goldstein and J. Dunkel}, date-added = {2014-05-08 23:13:46 +0000}, date-modified = {2014-05-08 23:15:16 +0000}, journal = {Phys. Rev. E}, pages = {010302(R)}, title = {Controlling active self-assembly through broken particle-shape symmetry}, volume = {89}, year = {2014}} @article{2014DuHi_NatPhys, author = {J. Dunkel and S. Hilbert}, date-added = {2014-05-08 23:12:25 +0000}, date-modified = {2014-05-08 23:13:30 +0000}, journal = {Nature Physics}, pages = {67-72}, title = {Consistent thermostatistics forbids negative absolute temperatures}, volume = {10}, year = {2014}} @article{2013Dunkel_NJP, author = {J. Dunkel and S. Heidenreich and M B\"ar and R. E. Goldstein}, date-added = {2013-09-29 23:32:36 +0000}, date-modified = {2013-09-29 23:33:52 +0000}, journal = {New J. Phys.}, pages = {045016}, title = {Minimal continuum theories of structure formation in dense active fluids}, volume = {15}, year = {2013}} @article{2013Wioland_PRL, author = {H. Wioland and F. G. Woodhouse and J. Dunkel and J. O. Kessler and R. E. Goldstein}, date-added = {2013-09-29 23:30:33 +0000}, date-modified = {2013-09-29 23:32:02 +0000}, journal = {Phys. Rev. Lett.}, pages = {268102}, title = {Confinement stabilizes a bacterial suspension into a spiral vortex}, volume = {110}, year = {2013}} @article{2013Dunkel_PRL, author = {J. Dunkel and S. Heidenreich and K. Drescher and H. H. Wensink and M. B\"ar and R. E. Goldstein}, date-added = {2013-09-29 23:26:25 +0000}, date-modified = {2013-09-29 23:26:25 +0000}, journal = {Phys. Rev. Lett.}, pages = {228102}, title = {Fluid dynamics of bacterial turbulence}, volume = {110}, year = {2013}} @article{2013Kantsler_PNAS, author = {V. Kantsler and J. Dunkel and M. Polin and R. E. Goldstein}, date-added = {2013-01-02 16:03:07 +0000}, date-modified = {2013-02-04 02:02:47 +0000}, journal = {Proc. Natl. Acad. Sci. USA}, number = {4}, pages = {1187-1192}, title = {Ciliary contact interactions dominate surface scattering of swimming eukaryotes}, volume = {110}, year = {2013}} @article{2012Wensink, author = {H. H. Wensink and J. Dunkel and S. Heidenreich and K. Drescher and R. E. Goldstein and H. L\"{o}wen and J. M. Yeomans}, date-added = {2012-08-28 22:31:56 +0100}, date-modified = {2012-10-01 12:49:23 +0100}, journal = {Proc. Natl. Acad. Sci. USA}, number = {36}, pages = {14308-14313}, title = {Meso-scale turbulence in living fluids}, volume = {109}, year = {2012}} @article{2012DuWe, author = {J. Dunkel and S. Weber}, date-added = {2012-08-16 21:20:54 +0100}, date-modified = {2012-08-28 22:31:34 +0100}, journal = {Proc. Natl. Acad. Sci. USA}, number = {35}, pages = {E2304}, title = {Improving risk assessment for biodiversity conservation}, volume = {109}, year = {2012}} @article{2011QuEtAl, author = {S. Quinodoz and M. Thomas and J. Dunkel and E. M. Sch\"otz}, date-added = {2010-10-30 02:37:29 +0100}, date-modified = {2011-04-15 13:58:55 +0100}, journal = {J. Stat. Phys.}, number = {6}, pages = {1324-1336}, title = {{The more the merrier? - Entropy and statistics of asexual reproduction in freshwater planarians}}, volume = {142}, year = {2011}} @article{2011DrEtAl, author = {K. Drescher and J. Dunkel and L. H. Cisneros and S. Ganguly and R. E. Goldstein}, date-added = {2010-10-30 02:36:14 +0100}, date-modified = {2012-08-16 21:22:14 +0100}, journal = {Proc. Natl. Acad. Sci. USA}, number = {27}, pages = {10940-10945}, title = {Fluid dynamics and noise in bacterial cell-cell and cell-surface scattering}, volume = {109}, year = {2011}} @article{2011ZaDuYe, author = {I. M. Zaid and J. Dunkel and J. M. Yeomans}, date-added = {2010-09-15 10:23:13 -0400}, date-modified = {2012-08-16 21:20:34 +0100}, journal = {J. R. Soc. Interface}, pages = {1314-1331}, title = {L\'evy Fluctuations and Mixing in Dilute Suspensions of Algae and Bacteria}, volume = {8}, year = {2011}} @article{2011DuTaSc_PhysBiol, author = {J. Dunkel and J. Talbot and E. M. Sch\"otz}, date-added = {2010-09-15 10:21:29 -0400}, date-modified = {2021-07-13 20:54:06 -0400}, journal = {Phys. Biol.}, pages = {026003}, title = {Memory and obesity affect the population dynamics of asexual freshwater planarians}, volume = {8}, year = {2011}} @article{2010PuDuYe, author = {V. B. Putz and J. Dunkel and J. M. Yeomans}, date-added = {2010-06-01 14:15:35 +0100}, date-modified = {2010-10-09 22:13:40 +0100}, doi = {doi:10.1016/j.chemphys.2010.04.025}, journal = {Chem. Phys.}, number = {2-3}, pages = {557-567}, title = {{CUDA simulations of active dumbbell suspensions}}, volume = {375}, year = {2010}, bdsk-url-1 = {http://dx.doi.org/10.1016/j.chemphys.2010.04.025}} @article{2010DuPuZaYe, author = {J. Dunkel and V. B. Putz and I. M. Zaid and J. M. Yeomans}, date-added = {2010-03-29 12:23:04 +0100}, date-modified = {2010-08-24 09:11:52 +0100}, journal = {Soft Matter}, keywords = {doi:10.1039/C0SM00164C}, pages = {4268-4276}, title = {Swimmer-tracer scattering at low Reynolds number}, volume = {6}, year = {2010}} @article{2009DuZa, author = {J. Dunkel and I. M. Zaid}, date-added = {2009-07-10 10:57:47 +0100}, date-modified = {2010-03-29 12:24:34 +0100}, journal = {Phys. Rev. E}, number = {2}, pages = {021903}, title = {Noisy swimming at low {R}eynolds numbers}, volume = {80}, year = {2009}} @article{2009CuDu, author = {D. Cubero and J. Dunkel}, date-added = {2009-02-27 09:55:25 +0000}, date-modified = {2009-08-28 10:18:32 +0100}, journal = {EPL}, number = {3}, pages = {30005}, title = {Stationarity, soft ergodicity, and entropy in relativistic systems}, volume = {87}, year = {2009}} @article{2009DuHaHi, author = {J. Dunkel and P. H\"anggi and S. Hilbert}, date-added = {2009-02-24 11:56:32 +0000}, date-modified = {2009-10-05 14:22:06 +0100}, journal = {Nature Physics}, pages = {741-747}, title = {Nonlocal observables and lightcone averaging in relativistic thermodynamics}, volume = {5}, year = {2009}} @article{2010DuWe_Long, author = {J. Dunkel and S. Weber}, date-added = {2008-11-26 12:53:03 +0000}, date-modified = {2010-11-26 01:08:20 +0000}, doi = {doi:10.1287/opre.1090.0784}, journal = {Operations Research}, number = {5}, pages = {1505-1521}, title = {Stochastic root finding and efficient estimation of convex risk measures}, volume = {58}, year = {2010}, bdsk-url-1 = {http://dx.doi.org/10.1287/opre.1090.0784}} @article{2009DuHaWe, author = {J. Dunkel and P. H\"anggi and S. Weber}, date-added = {2008-10-30 12:01:34 +0000}, date-modified = {2009-02-24 12:41:11 +0000}, journal = {Phys. Rev. E}, pages = {010101(R)}, title = {Time parameters and {L}orentz transformations of relativistic stochastic processes}, volume = {79}, year = {2009}} @article{2009DuHa, author = {J. Dunkel and P. H\"anggi}, date-added = {2008-10-30 12:00:19 +0000}, date-modified = {2010-10-10 23:02:27 +0100}, journal = {Physics Reports}, number = {1}, pages = {1-73}, title = {Relativistic {B}rownian motion}, volume = {471}, year = {2009}} @article{2000EbErDuJe, author = {W. Ebeling and U. Erdmann and J. Dunkel and M. Jenssen}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {J. Stat. Phys.}, month = {October}, number = {1/2}, pages = {443-457}, title = {Nonlinear Dynamics and Fluctuations of Dissipative {T}oda Chains}, volume = {101}, year = {2000}} @article{2001DuEbEr, author = {J. Dunkel and W. Ebeling and U. Erdmann}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Eur. Phys. J. B}, number = {4}, pages = {511-524}, title = {Thermodynamics and transport in active {M}orse Chains}, volume = {24}, year = {2001}} @article{2001DuEbErMa, author = {J. Dunkel and W. Ebeling and U. Erdmann and V. A. Makarov}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Int. J. Bif. \& Chaos}, number = {11}, optmonth = {November}, pages = {2359-2377}, title = {Coherent motions and clusters in a dissipative {M}orse ring chain}, volume = {12}, year = {2002}} @article{2003ChDu, author = {A. Chetverikov and J. Dunkel}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Eur. Phys. J. B}, number = {2}, pages = {239-253}, title = {Phase behavior and collective excitations of the {M}orse ring chain}, volume = {35}, year = {2003}} @article{2003DuEbScRo, author = {J. Dunkel and W. Ebeling and J. W. P. Schmelzer and G. R{\"o}pke}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Physica D}, number = {3-4}, optmonth = {November}, pages = {158-174}, title = {A dissipative one-dimensional collision model with intermediate energy storage}, volume = {185}, year = {2003}} @article{2003DuSGEbHa, author = {J. Dunkel and L. Schimansky-Geier and W. Ebeling and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {061118}, title = {{K}ramers problem in evolutionary strategies}, volume = {67}, year = {2003}} @article{2004DuEbTr, author = {J. Dunkel and W. Ebeling and S. Trigger}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {046406}, title = {Active and passive {B}rownian motion of charged grains in dusty plasma models}, volume = {70}, year = {2004}} @article{2004DuSGEb, author = {J. Dunkel and L. Schimansky-Geier and W. Ebeling}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Evol. Comput.}, number = {1}, pages = {1-17}, title = {Exact solutions for evolutionary strategies on harmonic landscapes}, volume = {12}, year = {2004}} @article{2004DuSGHiHa, author = {J. Dunkel and L. Schimansky-Geier and S. Hilbert and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {056118}, title = {Stochastic resonance in biological nonlinear evolution models}, volume = {69}, year = {2004}} @article{2005DuHa, author = {J. Dunkel and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {016124}, title = {Theory of the relativistic {B}rownian motion: {T}he (1+1)-dimensional case}, volume = {71}, year = {2005}} @article{2005DuHa_2, author = {J. Dunkel and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {036106}, title = {Theory of the relativistic {B}rownian motion: {T}he (1+3)-dimensional case}, volume = {72}, year = {2005}} @article{2005DuTr, author = {J. Dunkel and S. Trigger}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. A}, pages = {052102}, title = {Time-dependent entropy of simple quantum model systems}, volume = {71}, year = {2005}} @article{2006DuHa, author = {J. Dunkel and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, note = {\textit{Erratum}, Phys. Rev. E 74:069902(E), 2006}, optannote = {arXiv:cond-mat/0607082}, optnumber = {5}, pages = {051106}, title = {Relativistic {B}rownian motion: From a microscopic binary collision model to the {L}angevin equation}, volume = {74}, year = {2006}} @article{2006DuHi, author = {J. Dunkel and S. Hilbert}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Physica A}, number = {2}, optnote = {arXiv:cond-mat/0511501}, pages = {390-406}, title = {Phase transitions in small systems: {M}icrocanonical vs. canonical ensembles}, volume = {370}, year = {2006}} @article{2006HiDu, author = {S. Hilbert and J. Dunkel}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. E}, pages = {011120}, title = {Nonanalytic microscopic phase transitions and temperature oscillations in the microcanonical ensemble: An exactly solvable $1d$-model for evaporation}, volume = {74}, year = {2006}} @article{2007CuEtAl, author = {D. Cubero and J. Casado-Pascual and J. Dunkel and P. Talkner and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Phys. Rev. Lett.}, optnumber = {17}, pages = {170601}, title = {{Thermal equilibrium and statistical thermometers in special relativity}}, volume = {99}, year = {2007}} @article{2007DuHa, author = {J. Dunkel and P. H\"anggi}, date-added = {2008-10-30 11:58:15 +0000}, date-modified = {2008-10-30 11:58:15 +0000}, journal = {Physica A}, number = {2}, pages = {559-572}, title = {{One-dimensional nonrelativistic and relativistic Brownian motions: A microscopic collision model}}, volume = {374}, year = {2007}} @article{2007DuTaHa, author = {J. Dunkel and P. Talkner and P. 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